We present a consensus-based checklist to improve and document the transparency of research reports in social and behavioural research. An accompanying online application allows users to complete the form and generate a report that they can submit …
Data Carpentry lesson to learn how to use command-line tools to perform quality control, align reads to a reference genome, and identify and visualize between-sample variation. A lot of genomics analysis is done using command-line tools for three …
In this deep dive session, Dr. Willa van Dijk discusses how transparency with data, materials, and code is beneficial for educational research and education researchers. She illustrates these points by sharing experiences with transparency that were …
Background
The Consolidated Standards of Reporting Trials (CONSORT) Statement is intended to facilitate better reporting of randomised clinical trials (RCTs). A systematic review recently published in the Cochrane Library assesses whether journal …
Welcome to R! Working with a programming language (especially if it’s your first time) often feels intimidating, but the rewards outweigh any frustrations. An important secret of coding is that even experienced programmers find it difficult and …
Files for this webinar are available at: https://osf.io/ewhvq/ This webinar focuses on how to use the Open Science Framework (OSF) to tie together and organize multiple projects. We look at example structures appropriate for organizing classroom …
Background There is wide agreement in the biomedical research community that research data sharing is a primary ingredient for ensuring that science is more transparent and reproducible. Publishers could play an important role in facilitating and …
The objective of this study was to evaluate the nature and extent of reproducible and transparent research practices in neurology publications. Methods The NLM catalog was used to identify MEDLINE-indexed neurology journals. A PubMed search of these …
RStudio Cheatsheets
The cheatsheets below make it easy to use some of our favorite packages. Cheatsheets include the following topics:
Python with R and Reticulate Cheatsheet: The reticulate package provides a comprehensive set of tools for …