Open Data and Materials

 

Nature earns ire over lack of code availability for Google DeepMind protein folding paper

A group of researchers is taking Nature to task for publishing a paper earlier this month about Google DeepMind’s protein folding prediction program without requiring the authors publish the code behind the work.

Open Resources for Biology Education (ORBE): a resource collection

In undergraduate life sciences education, open educational resources (OERs) increase accessibility and retention for students, reduce costs, and save instructors time and effort. Despite increasing awareness and utilization of these resources, OERs …

Responsible data sharing: Identifying and remedying possible re-identification of human participants

Open data collected from humans creates a tension between scholarly values of transparency and sharing on the one hand, and privacy and security on the other. A common solution is to make datasets anonymous by removing personally identifying …

ZooTraits: An R shiny app for exploring animal trait data for ecological and evolutionary research

Animal trait data are scattered across several datasets, making it challenging to compile and compare trait information across different groups. For plants, the TRY database has been an unwavering success for those ecologists interested in addressing …

A study on formalizing the knowledge of data curation activities across different fields

In recent years, with the trend of open science, there have been many efforts to share research data on the internet. To promote research data sharing, data curation is essential to make the data interpretable and reusable. In research fields such as …

brainlife.io: a decentralized and open-source cloud platform to support neuroscience research

Neuroscience is advancing standardization and tool development to support rigor and transparency. Consequently, data pipeline complexity has increased, hindering FAIR (findable, accessible, interoperable and reusable) access. brainlife.io was …

Declaration of Helsinki: ethical norm in pursuit of common global goals

The World Medical Association’s Declaration of Helsinki is in the process of being revised. The following amendments are recommended to be incorporated in pursuit of the common goal of promoting health for all. 1. Data-driven research that …

Open Educational Resources für die HNO-Heilkunde

Background Open educational resources (OER) are educational materials licensed openly by authors, permitting usage, redistribution, and in some instances, modification. OER platforms thereby serve as a medium for distributing and advancing teaching …

Seek and you may (not) find: A multi-institutional analysis of where research data are shared

Research data sharing has become an expected component of scientific research and scholarly publishing practice over the last few decades, due in part to requirements for federally funded research. As part of a larger effort to better understand the …

State of open science in cancer research

Purpose This study has been focused on assessing the Open Science scenario of cancer research during the period 2011–2021, in terms of the derived scientific publications and raw data dissemination. Methods A cancer search equation was executed in …
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