Reproducible Analyses

10 Things for Curating Reproducible and FAIR Research

10 Things for Curating Reproducible and FAIR Research (CURE-FAIR) provides standards-based guidelines to follow CURE-FAIR best practices with regards to publishing and archiving computationally reproducible studies, including the associated …

1Economics 270D: Research Transparency Methods in the Social Sciences

This course coversa range of approachesthat aim to enhance the transparency and reproducibility of social science research. It is appropriate for Ph.D. students in social science disciplines and related fields.

A 21 word solution.

One year after publishing "False-Positive Psychology," we propose a simple implementation of disclosure that requires but 21 words to achieve full transparency. This article is written in a casual tone. It includes phone-taken pictures of milk-jars …

A community-endorsed open-source lexicon for contrast agent–based perfusion MRI: A consensus guidelines report from the ISMRM Open Science Initiative for Perfusion Imaging (OSIPI)

This manuscript describes the ISMRM OSIPI (Open Science Initiative for Perfusion Imaging) lexicon for dynamic contrast-enhanced and dynamic susceptibility-contrast MRI. The lexicon was developed by Taskforce 4.2 of OSIPI to provide standardized …

A primer for choosing, designing and evaluating registered reports for qualitative methods

Registered reports are a publication format that involves peer reviewing studies both before and after carrying out research procedures. Although registered reports were originally developed to combat challenges in quantitative and confirmatory study …

A Primer on Systematic Review and Meta-analysis in Diabetes Research

A systematic review is a rigorous process that involves identifying, selecting, and synthesizing available evidence pertaining to an a priori–defined research question. The resulting evidence base may be summarized qualitatively or through a …

A Software Tool for Removing Patient Identifying Information from Clinical Documents

We created a software tool that accurately removes all patient identifying information from various kinds of clinical data documents, including laboratory and narrative reports. We created the Medical De-identification System (MeDS), a software tool …

A tutorial on cognitive modeling for cognitive aging research

Cognitive aging researchers are interested in understanding how cognitive processes change in old age, but the relationship between hypothetical latent cognitive processes and observed behavior is often complex and not fully accounted for in standard …

A Unified Framework to Quantify the Credibility of Scientific Findings

Societies invest in scientific studies to better understand the world and attempt to harness such improved understanding to address pressing societal problems. Published research, however, can be useful for theory or application only if it is …

Adapting open science and pre-registration to longitudinal research

Open science practices, such as pre-registration and data sharing, increase transparency and may improve the replicability of developmental science. However, developmental science has lagged behind other fields in implementing open science practices. …