About this resource

    Type of resources
    Full Course
    Education level(s)
    Graduate / Professional
    Primary user(s)
    student, teacher
    Subject area(s)
    Information Science
    Language(s)
    English
    Cluster
    Transparency and Reproducibility in Computation and Analysis, Ways of Working
    Last updated
    1 January 2020
    Full Course

    Reproducible Research Methods

    By Eric C. Anderson

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    Level Graduate / Professional · For student, teacher · Language English

    Abstract

    This is the website for the Autumn 2014 course “Reproducible Research Methods” taught by Eric C. Anderson at NOAA’s Southwest Fisheries Science Center. The course meets on Tuesdays and Thursdays from 3:30 to 4:30 PM in Room 188 of the Fisheries Ecology Division. It runs from Oct 7 to December 18.

    The goal of this course is for scientists, researchers, and students to learn:

    to write programs in the R language to manipulate and analyze data, to integrate data analysis with report generation and article preparation using knitr, to work fluently within the Rstudio integrated development environment for R, to use git version control software and GitHub to effectively manage source code, collaborate efficiently with other researchers, and neatly package their research.

    Keywords Analysis · Literate Programming · Reproducibility · Version Control