Open Scholarship Tools and Technologies

Programming with Python

The best way to learn how to program is to do something useful, so this introduction to Python is built around a common scientific task: data analysis. Arthritis Inflammation We are studying inflammation in patients who have been given a new …

Programming with R

The best way to learn how to program is to do something useful, so this introduction to R is built around a common scientific task: data analysis. Our real goal isn’t to teach you R, but to teach you the basic concepts that all programming depends …

Project Organization and Management for Genomics

Data Carpentry Genomics workshop lesson to learn how to structure your metadata, organize and document your genomics data and bioinformatics workflow, and access data on the NCBI sequence read archive (SRA) database. Good data organization is the …

PsyTeachR

Materials for the University of Glasgow Institute of Neuroscience and Psychology’s undergraduate and MSc methods courses + Experiences, insights, and materials for teaching R across all undergraduate and postgraduate levels.

Python for Harvesting Data on the Web

This session is an intermediate-to-advanced level class that offers some ideas for how to approach the following common data wrangling needs in research: 1) Obtain data and load it into a suitable data "container" for analysis, often via a web …

Python for Humanities

Python is a general purpose programming language that is useful for writing scripts to work effectively and reproducibly with data. This is an introduction to Python designed for participants with no programming experience. These lessons can be …

Qualitative Research Using Open Tools

Qualitative research has long suffered from a lack of free tools for analysis, leaving no options for researchers without significant funds for software licenses. This presents significant challenges for equity. This panel discussion will explore the …

R for Reproducible Scientific Analysis

This lesson in part of Software Carpentry workshop and teach novice programmers to write modular code and best practices for using R for data analysis. an introduction to R for non-programmers using gapminder data The goal of this lesson is to teach …

R for Social Scientists

Data Carpentry lesson part of the Social Sciences curriculum. This lesson teaches how to analyse and visualise data used by social scientists. Data Carpentry’s aim is to teach researchers basic concepts, skills, and tools for working with data so …

R para Análisis Científicos Reproducibles

Una introducción a R utilizando los datos de Gapminder. El objetivo de esta lección es enseñar a las programadoras principiantes a escribir códigos modulares y adoptar buenas prácticas en el uso de R para el análisis de datos. R nos provee un …